Undergraduate/graduate students supervised by me are italicized.
In Review/Submission/Revision
(33) Sustaita D, Wulf G, Mey K, Sethuraman A Form, function, and population genetics of Loggerhead Shrikes in California (in review)
(32) Castro D, Sanders C, Lastor S, Hausknecht-Buss H, Moron-Solano A, Zhang A, Massaro I, Kasler AM, Caceres L, Mekuria I, Vega B, Henry S, Johansen H, Vengerova G, Hristova RS, Zhang X, Read B, Sethuraman A Genome of a novel Sediminibacterium discovered in association with two species of freshwater stream Cyanobacteria in Southern California (in review) bioRxiv DOI: 10.1101/2021.08.20.457134
(31) Sethuraman A, Tovar A, Welch W, Dettmers R, Arce C, Skaggs T, Rothenberg A, Saisho R, Summerhays B, Cartmill R, Grenier C, Vasquez Y, Vansant H, Obrycki JJ Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior (in revision) bioRxiv DOI: 10.1101/2021.06.30.450623
(30) Grant T, Vourlitis G, Escobar M, Sethuraman A Chronic dry nitrogen inputs alter soil microbial community composition in Southern California semi-arid shrublands (in review)
(29) Vourlitis G, Steinecke D, Martinez T, Konda K, Rendon R, Khor S, Hall V, Sethuraman A Fire and post-fire management affects soil microbial abundance and activity in semi-arid shrubland soils (in revision)
(28) Mey K, Steinecke D, Gonzalez N, Sethuraman A Insights from population genetics on the conservation status of vertebrate species
(27) Sethuraman A, Sousa V, Hey J Model-based assessments of differential introgression and linked natural selection during divergence and speciation. bioRxiv DOI: 10.1101/786038
(26) Kratovil, J., Sethuraman, A., Weisrock DW, et al. Disentangling the species-tree of dusky salamanders muddled by historic introgression.
(25) Sethuraman, A, Jones A, Nunziata SO, Weisrock DW, Obrycki JJ. Range-wide Population genomics of Hippodamia convergens in the Americas.
(24) Lynch M, Sethuraman A Accounting for Gene Flow From Unsampled “Ghost Populations” While Estimating Evolutionary History under the Isolation with Migration model. bioRxiv DOI: 10.1101/733600 (in revision)
2021
(23) Rushworth C, Baucom R, Blackman B, Neiman M, Orive M, Sethuraman A, Ware J, Matute D Who are we now? A demographic assessment of the evolution societies. Evolution. DOI: 10.1111/evo.14168
(22) Sethuraman A, Janzen FJ, Weisrock DW, Obrycki JJ Insights from population genomics to enhance and sustain biological control of insect pests. Insects. DOI: 10.3390/insects11080462
(21) Webb A, Knoblauch J, Sabankar N, Sukesh Kallur A, Hey J, Sethuraman A The PopGen Pipeline Platform: A Software Platform for Facilitating Population Genomic Analyses. Molecular Biology and Evolution. DOI: 10.1093/molbev/msab113
2020
(20) Grenier C, Summerhays B, Cartmill R, Martinez T, Saisho R, Rothenberg A, Tovar A, Rynerson A, Scott J, Obrycki JJ, Sethuraman A Lack of phenotypic variation despite population structure in larval utilization of pea aphids in populations of the lady beetle Hippodamia convergens. Biological Control DOI: 10.1016/j.biocontrol.2020.104507
2019
(19) Vansant, H., Vasquez, Y. M., Obrycki, J. J., Sethuraman, A. Coccinellid host morphology dictates morphological diversity of the parasitoid wasp Dinocampus coccinellae. Biological Control DOI: 10.1101/460998
(18) Sethuraman, A., Gonzalez, N., Grenier, C., Kansagra, K., Mey, K., Nunez, S., Summerhays, B., Wulf, G. Continued disuse of multiple-testing correction methods in population genetics - a wake-up call? Molecular Ecology Resources. DOI: 10.1111/1755-0998.12969
2018
(17) Hey, J., Chung, Y., Sethuraman, A., Lachance, J., Tishkoff, S., Wang, Y. Phylogeny estimation by integration over Isolation with Migration models. Molecular Biology and Evolution. DOI: 10.1093/molbev/msy162
(16) Sethuraman, A. Estimating relatedness in admixed populations. G3. DOI: 10.1534/g3.118.200485
(15) Hendricks, S., Anderson, E.C., Antao, T.,Bernatchez L., Forester, B.R., Garner, B., Hand, B.K., Hohenlohe P.A., Kardos, M., Koop, B., Sethuraman, A., Waples, R.S., Luikart, G. Recent advances in conservation and population genomics data analysis. Evolutionary Applications. DOI: 10.1111/eva.12659
2017
(14) Sethuraman, A., Janzen, F.J., Rubio, M.A., Vasquez, Y., and Obrycki, J. Recent demographic histories of three predatory lady beetles reveals complex patterns of diversity and population size change in the United States. Insect Science. DOI: 10.1111/1744-7917.12481
(13) Mitchell, T.S., Refsnider, J.M., Sethuraman, A., Warner, D.A., Janzen, F.J. 2017. Experimental assessment of winter conditions on turtle nesting phenology and behavior. Evolutionary Ecology Research, 18: 271-280.
2016
(12) Pasala, A., Sethuraman, A., Vibhu, N.S. and Gorthi, R.P., Infosys Technologies, Inc., 2016. Method for providing context aware access in global software project management. U.S. Patent 9,324,059.
(11) Sethuraman, A. and Hey, J., 2016. IMa2p–parallel MCMC and inference of ancient demography under the Isolation with migration (IM) model. Molecular Ecology Resources, 16(1), pp.206-215. DOI: 10.1111/1755-0998.12437
(10) Knoblauch, J., Sethuraman, A. and Hey, J. 2016. IMGui - A browser-based GUI for Isolation with Migration Analyses. Molecular Biology and Evolution 34 (2): 500-504. DOI: 10.1093/molbev/msw252
2015
(9) Hey, J., Chung, Y. and Sethuraman, A., 2015. On the occurrence of false positives in tests of migration under an isolation‐with‐migration model.Molecular Ecology, 24(20), pp.5078-5083. DOI: 10.1111/mec.13381
(8) Sethuraman, A., Janzen, F.J. and Obrycki, J., 2015. Population genetics of the predatory lady beetle Hippodamia convergens. Biological Control, 84, pp.1-10. DOI:10.1016/j.biocontrol.2015.01.002
2014
(7) Sethuraman, A., McGaugh, S.E., Becker, M.L., Chandler, C.H., Christiansen, J.L., Hayden, S., LeClere, A., Monson-Miller, J., Myers, E.M., Paitz, R.T., Refsnider, J.M., and Janzen, F.J. 2014. Population genetics of Blanding’s turtle (Emys blandingii) in the midwestern United States. Conservation genetics, 15(1), pp.61-73. DOI:10.1007/s10592-013-0521-8
2013
(6) Shaffer, H.B., et al., 2013. The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage. Genome Biology, 14(3), p.1. DOI: 10.1186/gb-2013-14-3-r28
PhD Thesis:
(5) Sethuraman, A., "On inferring and interpreting genetic population structure - applications to conservation, and the estimation of pairwise genetic relatedness" (2013). Graduate Theses and Dissertations, Iowa State University. 13332. https://lib.dr.iastate.edu/etd/13332
Prior to 2013
(4) Gorthi, R.S., Niranjani, S., Pasala, A., Sethuraman, A. (2009) Applications of Collaborative Multi-Agent Technology to Business – A Comprehensive Survey. SETLabs Briefings on Knowledge Engineering and Management, Infosys Limited.
(3) Pasala, A., Sethuraman, A., Niranjani, S., Gorthi, R.P. (2009) Managing Global Software: the MAS way. SETLabs Briefings on Knowledge Engineering and Management, Infosys Limited.
(2) Pasala, A., Sethuraman, A., Niranjani S., Gorthi, R.P., Gadde B., Context-aware Mobile Assistant Agents in Software Project Management. Proceedings of IEEE TENCON 2008, IEEE. DOI: 10.1109/TENCON.2008.4766780
(1) Sethuraman, A., Yalla, K.K., Sarin, A. and Gorthi, R.P., 2008, January. Agents assisted software project management. In Proceedings of the 1st Bangalore Annual Compute Conference (p. 5). ACM. DOI: 10.1145/1341771.1341777
In Review/Submission/Revision
(33) Sustaita D, Wulf G, Mey K, Sethuraman A Form, function, and population genetics of Loggerhead Shrikes in California (in review)
(32) Castro D, Sanders C, Lastor S, Hausknecht-Buss H, Moron-Solano A, Zhang A, Massaro I, Kasler AM, Caceres L, Mekuria I, Vega B, Henry S, Johansen H, Vengerova G, Hristova RS, Zhang X, Read B, Sethuraman A Genome of a novel Sediminibacterium discovered in association with two species of freshwater stream Cyanobacteria in Southern California (in review) bioRxiv DOI: 10.1101/2021.08.20.457134
(31) Sethuraman A, Tovar A, Welch W, Dettmers R, Arce C, Skaggs T, Rothenberg A, Saisho R, Summerhays B, Cartmill R, Grenier C, Vasquez Y, Vansant H, Obrycki JJ Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior (in revision) bioRxiv DOI: 10.1101/2021.06.30.450623
(30) Grant T, Vourlitis G, Escobar M, Sethuraman A Chronic dry nitrogen inputs alter soil microbial community composition in Southern California semi-arid shrublands (in review)
(29) Vourlitis G, Steinecke D, Martinez T, Konda K, Rendon R, Khor S, Hall V, Sethuraman A Fire and post-fire management affects soil microbial abundance and activity in semi-arid shrubland soils (in revision)
(28) Mey K, Steinecke D, Gonzalez N, Sethuraman A Insights from population genetics on the conservation status of vertebrate species
(27) Sethuraman A, Sousa V, Hey J Model-based assessments of differential introgression and linked natural selection during divergence and speciation. bioRxiv DOI: 10.1101/786038
(26) Kratovil, J., Sethuraman, A., Weisrock DW, et al. Disentangling the species-tree of dusky salamanders muddled by historic introgression.
(25) Sethuraman, A, Jones A, Nunziata SO, Weisrock DW, Obrycki JJ. Range-wide Population genomics of Hippodamia convergens in the Americas.
(24) Lynch M, Sethuraman A Accounting for Gene Flow From Unsampled “Ghost Populations” While Estimating Evolutionary History under the Isolation with Migration model. bioRxiv DOI: 10.1101/733600 (in revision)
2021
(23) Rushworth C, Baucom R, Blackman B, Neiman M, Orive M, Sethuraman A, Ware J, Matute D Who are we now? A demographic assessment of the evolution societies. Evolution. DOI: 10.1111/evo.14168
(22) Sethuraman A, Janzen FJ, Weisrock DW, Obrycki JJ Insights from population genomics to enhance and sustain biological control of insect pests. Insects. DOI: 10.3390/insects11080462
(21) Webb A, Knoblauch J, Sabankar N, Sukesh Kallur A, Hey J, Sethuraman A The PopGen Pipeline Platform: A Software Platform for Facilitating Population Genomic Analyses. Molecular Biology and Evolution. DOI: 10.1093/molbev/msab113
2020
(20) Grenier C, Summerhays B, Cartmill R, Martinez T, Saisho R, Rothenberg A, Tovar A, Rynerson A, Scott J, Obrycki JJ, Sethuraman A Lack of phenotypic variation despite population structure in larval utilization of pea aphids in populations of the lady beetle Hippodamia convergens. Biological Control DOI: 10.1016/j.biocontrol.2020.104507
2019
(19) Vansant, H., Vasquez, Y. M., Obrycki, J. J., Sethuraman, A. Coccinellid host morphology dictates morphological diversity of the parasitoid wasp Dinocampus coccinellae. Biological Control DOI: 10.1101/460998
(18) Sethuraman, A., Gonzalez, N., Grenier, C., Kansagra, K., Mey, K., Nunez, S., Summerhays, B., Wulf, G. Continued disuse of multiple-testing correction methods in population genetics - a wake-up call? Molecular Ecology Resources. DOI: 10.1111/1755-0998.12969
2018
(17) Hey, J., Chung, Y., Sethuraman, A., Lachance, J., Tishkoff, S., Wang, Y. Phylogeny estimation by integration over Isolation with Migration models. Molecular Biology and Evolution. DOI: 10.1093/molbev/msy162
(16) Sethuraman, A. Estimating relatedness in admixed populations. G3. DOI: 10.1534/g3.118.200485
(15) Hendricks, S., Anderson, E.C., Antao, T.,Bernatchez L., Forester, B.R., Garner, B., Hand, B.K., Hohenlohe P.A., Kardos, M., Koop, B., Sethuraman, A., Waples, R.S., Luikart, G. Recent advances in conservation and population genomics data analysis. Evolutionary Applications. DOI: 10.1111/eva.12659
2017
(14) Sethuraman, A., Janzen, F.J., Rubio, M.A., Vasquez, Y., and Obrycki, J. Recent demographic histories of three predatory lady beetles reveals complex patterns of diversity and population size change in the United States. Insect Science. DOI: 10.1111/1744-7917.12481
(13) Mitchell, T.S., Refsnider, J.M., Sethuraman, A., Warner, D.A., Janzen, F.J. 2017. Experimental assessment of winter conditions on turtle nesting phenology and behavior. Evolutionary Ecology Research, 18: 271-280.
2016
(12) Pasala, A., Sethuraman, A., Vibhu, N.S. and Gorthi, R.P., Infosys Technologies, Inc., 2016. Method for providing context aware access in global software project management. U.S. Patent 9,324,059.
(11) Sethuraman, A. and Hey, J., 2016. IMa2p–parallel MCMC and inference of ancient demography under the Isolation with migration (IM) model. Molecular Ecology Resources, 16(1), pp.206-215. DOI: 10.1111/1755-0998.12437
(10) Knoblauch, J., Sethuraman, A. and Hey, J. 2016. IMGui - A browser-based GUI for Isolation with Migration Analyses. Molecular Biology and Evolution 34 (2): 500-504. DOI: 10.1093/molbev/msw252
2015
(9) Hey, J., Chung, Y. and Sethuraman, A., 2015. On the occurrence of false positives in tests of migration under an isolation‐with‐migration model.Molecular Ecology, 24(20), pp.5078-5083. DOI: 10.1111/mec.13381
(8) Sethuraman, A., Janzen, F.J. and Obrycki, J., 2015. Population genetics of the predatory lady beetle Hippodamia convergens. Biological Control, 84, pp.1-10. DOI:10.1016/j.biocontrol.2015.01.002
2014
(7) Sethuraman, A., McGaugh, S.E., Becker, M.L., Chandler, C.H., Christiansen, J.L., Hayden, S., LeClere, A., Monson-Miller, J., Myers, E.M., Paitz, R.T., Refsnider, J.M., and Janzen, F.J. 2014. Population genetics of Blanding’s turtle (Emys blandingii) in the midwestern United States. Conservation genetics, 15(1), pp.61-73. DOI:10.1007/s10592-013-0521-8
2013
(6) Shaffer, H.B., et al., 2013. The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage. Genome Biology, 14(3), p.1. DOI: 10.1186/gb-2013-14-3-r28
PhD Thesis:
(5) Sethuraman, A., "On inferring and interpreting genetic population structure - applications to conservation, and the estimation of pairwise genetic relatedness" (2013). Graduate Theses and Dissertations, Iowa State University. 13332. https://lib.dr.iastate.edu/etd/13332
Prior to 2013
(4) Gorthi, R.S., Niranjani, S., Pasala, A., Sethuraman, A. (2009) Applications of Collaborative Multi-Agent Technology to Business – A Comprehensive Survey. SETLabs Briefings on Knowledge Engineering and Management, Infosys Limited.
(3) Pasala, A., Sethuraman, A., Niranjani, S., Gorthi, R.P. (2009) Managing Global Software: the MAS way. SETLabs Briefings on Knowledge Engineering and Management, Infosys Limited.
(2) Pasala, A., Sethuraman, A., Niranjani S., Gorthi, R.P., Gadde B., Context-aware Mobile Assistant Agents in Software Project Management. Proceedings of IEEE TENCON 2008, IEEE. DOI: 10.1109/TENCON.2008.4766780
(1) Sethuraman, A., Yalla, K.K., Sarin, A. and Gorthi, R.P., 2008, January. Agents assisted software project management. In Proceedings of the 1st Bangalore Annual Compute Conference (p. 5). ACM. DOI: 10.1145/1341771.1341777
